You can scan a nucleic acid sequence for known consensus sequences and protein sequences for known motifs that are defined in a subsequence file. A subsequence may consist of one, two or three parts, with the permitted gap between each part defined, as well as the allowed mismatch for each part in a search.
To use this functionality, a Sequence window must be the active window, and a subsequence file must be available.
Searching for nucleic acid subsequences